Publications

2020

​

23) Kong JH, Young CB, Pusapati GV, Patel CB, Ho S, Krishnan A, Lin JI, Devine W, Moreau de Bellaing A, Athni TS, Aravind L, Gunn TM, Lo CW, Rohatgi R*. (2020). A Membrane-Tethered Ubiquitination Pathway Regulates Hedgehog Signaling and Heart Development. Developmental Cell. 55(4):432-449.e12. PubMed. (IF: 12.27)

22) Rahve IS, Krishnan A, Manoj N*. (2020). Evolutionary history of histamine receptors: Early vertebrate origin and expansion of the H3-H4 subtypes. Molecular Phylogenetics and Evolution. 154:106989. PubMed. (IF: 4.2)

21) Krishnan A, Burroughs AM, Iyer LM, Aravind L*. (2020). Comprehensive classification of ABC ATPases and their functional radiation in nucleoprotein dynamics and biological conflict systems. Nucleic Acids Research. Volume 48, Issue 18, Pages 10045–10075. PubMed. (Featured Survey and Summary Article) (IF: 16.9)


2019

20) Krishnan A, Degnan BM, Degnan SM*. (2019). The first identification of complete Eph-ephrin signalling in ctenophores and sponges reveals a role for neofunctionalization in the emergence of signalling domains. BMC Evolutionary Biology., 19:96 PubMed. (IF: 3.7)

 

2018

19) Krishnan A, Burroughs AM, Iyer LM, Aravind L*. (2018). Unexpected evolution of lesion-recognition modules in eukaryotic NER and kinetoplast DNA-dynamics proteins from bacterial mobile elements. iScience.. Volume 9, Issue, P192-208, PubMed. (IF: 4.5)
 

18) Krishnan A, Iyer LM, Holland SJ, Boehm T, Aravind L*.(2018). Diversification of AID-APOBEC-like deaminases in metazoa: identification of novel clades and widespread roles in immunity. PNAS. Vol. 115, no. 14; E3201–E3210. PubMed. (IF: 11.2)
 

17) Pusapati GV, Kong JH, Patel BB, Krishnan A, Sagner A, Kinnebrew M, Briscoe J, Aravind L, Rohatgi R*. (2018). CRISPR Screens Uncover Genes that Regulate Target Cell Sensitivity to the Morphogen Sonic Hedgehog. Developmental Cell. Jan 8;44(1):113-129.e8. (Featured Cover page article) PubMed. (IF: 12.27)

 

2017

16) Attwood MM, Krishnan A, Almén MS, Schiöth HB*. (2017). Highly diversified expansions shaped the evolution of membrane bound proteins in metazoans. Scientific Reports. 2017 Sep 28;7(1):12387. PubMed. (IF: 4.3)
 

15) Hall MR, Kocot KM, Baughman KW, Fernandez-Valverde SL, Gauthier MEA, Hatleberg WL, Krishnan A, McDougall C, Motti CA, Shoguchi E, Wang T, Xiang X, Zhao M, Bose U, Shinzato U, Hisata K, Fujie M, Kanda M, Cummins SF, Satoh N, Degnan SM and Degnan BM*. (2017). The crown-of-thorns starfish genome as a guide for biocontrol of this coral reef pest. Nature. 544 (7649): 231-234. (Altmetric score of 344 placed the article in the top 1% of all research outputs, picked up by 27 news outlets including The Guardian, BBC, Science Daily, The Weekend Australian, among many more). PubMed. (IF: 42.78)

 

2016

14) Krishnan A, Nijmeijer S, de Graaf C, Schiöth HB*. 2016 Classification, Nomenclature and Structural aspects of Adhesion GPCRs. Handbook of experimental pharmacology. PubMed. Series Title: Adhesion G Protein-coupled Receptors. Molecular, Physiological and Pharmacological Principles in Health and Disease. (Book Chapter)
 

13) Attwood MM, Krishnan A, Pivotti V, Yazdi S, Almén MS, Schiöth HB*. (2016). Topology based identification and comprehensive classification of four-transmembrane helix containing proteins (4TMs) in the human genome. BMC Genomics. 17(1):268. PubMed. (IF: 3.9)

 

2015

12) Duc DL, Renaud G, Krishnan A, Almén MS, Huynen L, Prohaska SJ, Ongyerth M, Bitarello BD, Schiöth HB, Hofreiter M, Stadler PF, Prüfer K,Lambert D, Kelso J, Schöneberg T*. 2015. Kiwi genome provides insights into nocturnal adaptation. Genome Biology. Kiwi genome provides insights into nocturnal adaptation. Genome Biology. 16:147 (Altmetric score of 207 placed the article in top 5% of all research outputs, picked up by 17 news outlets including The Seattle Times and New Zealand Herald) PubMed. (IF: 10.8)
 

11) Eriksson A, Williams MJ, Voisin S, Hansson I, Krishnan A, Philippot G, Yamskova O, Herisson FM, Dnyansagar R, Moschonis G, Manios Y, Chrousos GP, Olszewski PK, Frediksson R, Schiöth HB*. (2015). Implication of coronin 7 in body weight regulation in humans, mice and flies. BMC Neuroscience. 16(1):13. PubMed. (IF: 2.8)
 

10) Harty BL, Krishnan A, Sanchez NE, Schioth HB, Monk KR*. (2015). Defining the gene repertoire and spatiotemporal expression profiles of adhesion G protein-coupled receptors in zebrafish. BMC Genomics. 2015, 16:62. PubMed. (IF: 3.9)
 

9) Krishnan A*, Mustafa A, Almen M, Fredriksson R, Williams MJ, Schioth HB*. (2015). Evolutionary hierarchy of vertebrate-like heterotrimeric G protein families. Molecular Phylogenetics and Evolution. PubMed. (Corresponding author) (IF: 4.2)
 

8) Hamann J, Aust G, Arac D, Engel FB, Formstone C, Fredriksson R, Hall RA, Harty BL, Kirchhoff C, Knapp B, Krishnan A, Liebscher I, Lin HH, Martinelli DC, Monk KR, Peeters MC, Piao X, Prömel S, Schöneberg T, Schwartz TW, Singer K, Stacey M, Ushkaryov YA, Vallon M, Wolfrum U, Wright MW, Xu L, Langenhan, and Schiöth HB*. (2015). International Union of Basic and Clinical Pharmacology. XCIV. Adhesion G Protein-Coupled Receptors. Pharmacological Reviews. 67(2):338-367. PubMed. (IUPHAR Nomenclature Report) (IF: 25.4)
 

7) Krishnan A*, Schioth HB. (2015). The role of G protein-coupled receptors in the early evolution of neurotransmission and the nervous system. Journal of Experimental Biology. 218(Pt 4):562-571. PubMed. (Review article for a special issue; Corresponding author). (IF: 3.3)

 

2014

6) Krishnan A, Dnyansagar R, Almen M, Williams MJ, Fredriksson R, Manoj N, Schioth HB*. (2014). The GPCR repertoire in the demosponge Amphimedon queenslandica : insights into the GPCR system at the early divergence of animals. BMC Evolutionary Biology. 14(1):270. PubMed. (IF: 3.7)
 

5) Krishnan A, Almen MS, Fredriksson R, Schioth HB*. (2014). Insights into the origin of nematode chemosensory GPCRs: putative orthologs of the Srw family are found across several phyla of protostomes. PLoS One., 9(3):e93048. PubMed. (IF: 3.2)

 

2013

4) Krishnan A, Almen MS, Fredriksson R, Schioth HB*. (2013). Remarkable similarities between the hemichordate (Saccoglossus kowalevskii) and vertebrate GPCR repertoire. Gene. 526(2):122-133. PubMed. (IF: 3.6)
 

3) Valsalan R, Krishnan A, Almen MS, Fredriksson R, Schioth HB*. (2013). Early vertebrate origin of melanocortin 2 receptor accessory proteins (MRAPs). General and Comparative Endocrinology. 188:123-132. PubMed. (IF: 2.8)

 

2012

2) Vastermark A, Krishnan A, Houle ME, Fredriksson R, Cerda-Reverter JM, Schioth HB*. (2012). Identification of distant Agouti-like sequences and re-evaluation of the evolutionary history of the Agouti-related peptide (AgRP). PLoS One. 7(7):e40982. PubMed. (IF: 3.2)
 

1) Krishnan A, Almen MS#, Fredriksson R, Schioth HB*. (2012). The origin of GPCRs: identification of mammalian like Rhodopsin, Adhesion, Glutamate and Frizzled GPCRs in fungi. PLoS One. 7(1):e29817. PubMed. (Recommended by Faculty of 1000). (IF: 3.2)